Here is the check list I have been going by. It relates to a GS but it's close enough for my R.
• Remove the seat.
• Remove side panels (a 46.

.
• Remove fuel tank (a 16.5).
• Secure stand, BMW No. 00 1 520, to motorcycle with spacers, BMW No. 00 1 529.
• Disconnect plug for air-temperature sensor from air filter cover.
• Remove air filter cover.
• Remove the air filter element.
• Remove the intake air pipe.
• Disconnect plug for oxygen sensor (1) and re- move cable.
• Remove the plug/fuel pump unit (2) from the frame.
• Disconnect hose clamps/throttle stub pipes and push the stubs into the air filter box.
• Disconnect plugs of injection valves.
• Remove holders of injection valves.
• Remove injection valves from throttle stub pipes.
• Remove top screw from spring strut and lower the rear wheel drive.
• Remove the left footrest plate (a 46.16).
• Remove securing screws for brake master cylinder from footrest plate.
• Remove the right footrest plate (a 46.17).
• Remove rear-frame fasteners on left and right at front, but only loosen strut fasteners.
• Remove rear silencer.
• Disconnect cables from starter motor.
• Remove starter motor.
• Disconnect gear-indicator plug (3) and remove the cable.
• Remove hydraulic spring adjuster.
• Remove rear brake fluid reservoir from its holder.
• Remove brake line (4) from the rear frame. • Remove brake line from swinging arm.
• Disconnect plug (5) of the ABS sensor.
• Remove the rear ABS sensor.
• Remove rear brake caliper.
• Use cable ties to secure the brake caliper to the rear frame.
• Disconnect clutch-system bleed line from rear frame.
• Remove cable ties (5) from left air filter box.
• Tilt the rear frame up and secure it in this position with a strap attached to the handlebars.
• Remove spring strut.
• Use hose clip pliers, BMW No. 17 5 500, to disconnect hose for crankcase breather from air-fil- ter box.
• Remove air filter box.
• Remove the fuel distributor.
• Remove clutch slave cylinder.
• Remove clutch pushrod.
• Remove rear battery carrier fasteners. Disconnect ground cable below the battery carrier.
• Always use oiled guide pins, BMW No. 23 1 820, when removing or installing the gearbox.
• Remove the rear wheel, rear wheel drive and swinging arm together with the gearbox.
Now you can get to the clutch itself. You'll need another special tool to lock the clutch housing.